Code and data - The Occurrence Birth-Death Diffusion Process: Unraveling Diversification Histories with Fossils and Heterogeneous Rates
收藏DataCite Commons2026-05-02 更新2026-05-07 收录
下载链接：
https://zenodo.org/doi/10.5281/zenodo.16992580
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资源简介：
Overview
This project introduces the Occurrence Birth-Death Diffusion (OBDD) model and applies it to study the diversification dynamics of cetaceans. It builds on the Tapestree.jl framework.
Directory Structure and Description
OBDD_illustration_figure.Rmd: Code for producing Figure 1
Figure_augmented_tree.py: Code for producing Figure 2
Calibration/: Model validation
.jl files: Julia scripts
.submit files: HTcondor cluster submission files
datasets_calibration/: simulated datasets
outputs/: MCMC trace files
Cetacea/: Diversification analyses
.jl files: Julia scripts
.submit files: HTcondor cluster submission files
outputs/: MCMC trace files
提供机构：
Zenodo
创建时间：
2025-08-29
