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iPSCORE Analysis: Early Developmental Regulatory Variation Mashr Results

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Figshare2024-11-13 更新2026-04-28 收录
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https://figshare.com/articles/dataset/iPSCORE_Analysis_Early_Developmental_Regulatory_Variation_Mashr_Results/27327996
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This file contains the mashr results run on the three early developmental iPSCORE tissues and 47 adult GTEx tissues. We used mashr to calculate the tissue-specificity of pairs of eGenes and their eQTL lead variants across all 50 tissues. The file contains the following columns; gene_variant the space-separated identifier for the Gencode gene ID and the eQTL lead variant, ntissues_tested the total number of tissues that the gene_variant was tested in, ntissues_significant the total number of tissues that the gene_variant was significant (local false sign rate [LFSR] nipscore_tested the number of iPSCORE tissues that the gene_variant was tested in, ngtex_tested the number of GTEx tissues that the gene_variant was tested in. The remaining columns contain the mashr-calculated LFSR values for the three iPSCORE tissues and 47 GTEx tissues.
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2024-11-13
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