S8 Table -

(A) Bioinformatics summary statistics. (B) Genomic contributions (%) from parental strains in the H3-E and H4-E hybrids. (C) LOH regions. (D) SnpEff analysis of the novel polymorphisms in H3-E, H4-E, and evolved population. (E) Number of SNPs in evolved H3-4 and H4-1 populations. (F) CNV results comparing evolved hybrids with their ancestral hybrid. Only CNVs with 1 or more copies are listed. (G) RNA-seq analysis between H3-E and H3-A hybrids. (H) Enriched GO terms of hybrid genes showing differential expression between ancestral and evolved hybrids. (I) Genes exhibiting Allele-Specific Expression (ASE), with values approximating 1 indicating overexpression of S. cerevisiae alleles, and values close to 0 representing overexpression of S. eubayanus alleles. (XLSX)