Multi-species Axiom Plant SNP array
收藏NIAID Data Ecosystem2026-03-11 收录
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https://figshare.com/articles/dataset/Multi-species_Axiom_Plant_SNP_array/12465209
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资源简介:
Data for a multi-species Single Nucleotide Polymorphism (SNP) Array built and validated using the AxiomTM technology contemplating SNPs for four different plant species as follows:
Anacardium occidentale (Cashew Nut tree) : 16,504 SNPsAraucaria angustifolia (Brazilian Pine): 3,400 SNPsManihot esculenta (Cassava): 3,417 SNPsEucalyptus spp. (Eucalypt tree): 2,000 SNPs
The data set includes the following information: organism, organism_code, marker_name, probeset ID, marker_id, call_rate_min, call_rate_max, conversion_type according to the Axiom criteria, SNP validation status, chromosome, position, genome_build used for SNP address (when available), probe sequence on array, Allele_A, Allele_B, SNP variant Ordered_Alleles
Observation: Although SNPs for the plant Coffea canephora (Coffee) are also part of the Axiom array content, the SNP information for this species could not be made public yet.
创建时间:
2020-06-11



