Protein Graphs Dataset from PDB

This dataset contains the protein graphs constructed from PDB, the Protein Data Bank (www.rcsb.org/pdb), used in the paper: Nilothpal Talukder and <strong>Mohammed J. Zaki</strong>. <strong>A distributed approach for graph mining in massive networks.</strong> <em>Data Mining and Knowledge Discovery: Special Issue on ECML/PKDD 2016 Journal Track Papers</em>, 30(5):1024–1052, 2016. URL: http://link.springer.com/article/10.1007/s10618-016-0466-x. The format of graphs is as follows: t # GID v VID VLABEL e VID1 VID2 ELABEL where GID is a graph identifier (integer) VID is a vertex identifier (integer) with VLABEL its vertex label (integer) VID1 VID2 denotes an edge between the two vertices, with ELABEL the edge label (integer)