NicheNet input networks

NIAID Data Ecosystem2026-03-14 收录

细胞间通讯分析

基因调控网络

数据链接：

https://figshare.com/articles/dataset/NicheNet_input_networks/21150736 数据链接链接失效反馈

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资源简介：

NicheNet input networks The directory should be unzipped and placed within the 'data/' folder

创建时间：

2022-09-17

RSK1-driven TRIM28-E2F1 feedback loop promotes castration-resistant prostate cancer progression

前列腺癌分子机制

基因调控网络

Castration-resistant prostate cancer (CRPC) marks the advanced and lethal stage of prostate cancer (PCa). TRIM28, also known as KAP1, is a transcriptional regulator recently shown to promote CRPC cell

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Enriched clusters in regulatory networks.

基因调控网络

转录因子基序

Functional annotation clustering of genes with a H3K27ac differently enriched promoter connected to transcription factors with motifs overrepresented in soleus and EDL myonuclei, respectively. Cluster

Figshare2021-11-09 更新10

GO:1903706 (regulation of hemopoiesis)

造血调控

基因调控网络

This network was assembled automatically by INDRA (http://indra.bio) by processing all available biomedical literature with multiple machine reading systems, and integrating curated pathway databases.

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Pathways identified by causal reasoning.

基因调控网络

因果推理分析

Causal reasoning [11] uses a large curated database of directed regulatory molecular interactions to identify the most plausible upstream regulators of a gene set with a proposed directionality (eg. d

Figshare2015-12-02 更新30

Statistical properties of the gold standard networks in the in silico network inference challenge.

网络推断

基因调控网络

In each of the three sub-challenges the number of nodes was held constant but the number of edges and regulator nodes was not. There were five gold standard networks in each of the three sub-challenge

NIAID Data Ecosystem10

NicheNet input networks

资源简介：

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