Supplementary information - Assembling Genomes With Complex Genomic Repeats

Update (v2.1.0-mtReads) - Added combined fast5 files for mtDNA run D/132397, and reference mitochondrial genome: reads_all_D_132397.fast5 circ-Nb-ec3-mtDNA.fasta Update (v2.0.0-mtReads) - Added mitochondrial sequence raw read files (as split and combined fast5 files), and summary statistics (gap-compressed identity, and mean estimated basecaller accuracy): Nbra_CFED_mtDNA_reads.tar gci_graph.zip These data complement the poster and lightning talk to be given by David Eccles at the London Calling conference in 2017: MIMR_EC3_ONTDECAF_t1.fasta.gz -- initial attempt at a genome assembly with Canu v1.4 (3x error corrected) NbL5_ONTDECAF_t1.contigs.flipped.gfa -- assembly graph associated with the corrected genome tangled_web_300.png -- background image of the poster (generated from the Canu GFA)