Data from: Whole genome sequencing shows sleeping sickness relapse is due to parasite regrowth and not reinfection

15RE_R1First read pairs for Sample 15 BT-RE, in fastq format. See Table 1 in text.15RE_R2Second read pairs for Sample 15 BT-RE, in fastq format. See Table 1 in text.45BT_R1First read pairs for Sample 45 BT, in fastq format. See Table 1 in text.45BT_R2Second read pairs for Sample 45 BT, in fastq format. See Table 1 in text.57AT_R1First read pairs for Sample 57 AT, in fastq format. See Table 1 in text.57AT_R2Second read pairs for Sample 57 AT, in fastq format. See Table 1 in text.85BT_R1First read pairs for Sample 85 BT, in fastq format. See Table 1 in text.85BT_R2Second read pairs for Sample 85 BT, in fastq format. See Table 1 in text.141BT_R1First read pairs for Sample 141 BT, in fastq format. See Table 1 in text.141BT_R2Second read pairs for Sample 141 BT, in fastq format. See Table 1 in text.146AT_R1First read pairs for Sample 146 AT, in fastq format. See Table 1 in text.146AT_R2Second read pairs for Sample 146 AT, in fastq format. See Table 1 in text.146BT_R1First read pairs for Sample 146 BT, in fastq format. See Table 1 in text.146BT_R2Second read pairs for Sample 146 BT, in fastq format. See Table 1 in text.148AT_R1First read pairs for Sample 148 AT, in fastq format. See Table 1 in text.148AT_R2Second read pairs for Sample 148 AT, in fastq format. See Table 1 in text.148BT_R1First read pairs for Sample 148 BT, in fastq format. See Table 1 in text.148BT_R2Second read pairs for Sample 148 BT, in fastq format. See Table 1 in text.163AT_R1First read pairs for Sample 163 AT, in fastq format. See Table 1 in text.163AT_R2Second read pairs for Sample 163 AT, in fastq format. See Table 1 in text.163REL_R1First read pairs for Sample 163 AT-RE, in fastq format. See Table 1 in text.163REL_R2Second read pairs for Sample 163 AT-RE, in fastq format. See Table 1 in text.340AT_R1First read pairs for Sample 340 AT, in fastq format. See Table 1 in text.340AT_R2Second read pairs for Sample 340 AT, in fastq format. See Table 1 in text.346AT_R1First read pairs for Sample 346 AT, in fastq format. See Table 1 in text.346AT_R2Second read pairs for Sample 346 AT, in fastq format. See Table 1 in text.346REL_R1First read pairs for Sample 346 AT-RE, in fastq format. See Table 1 in text.346REL_R2Second read pairs for Sample 346 AT-RE, in fastq format. See Table 1 in text.346BT_R1First read pairs for Sample 346 BT, in fastq format. See Table 1 in text.346BT_R2Second read pairs for Sample 346 BT, in fastq format. See Table 1 in text.348BT_R1First read pairs for Sample 348 BT, in fastq format. See Table 1 in text.348BT_R2Second read pairs for Sample 348 BT, in fastq format. See Table 1 in text.349AT_R1First read pairs for Sample 349 AT, in fastq format. See Table 1 in text.349AT_R2Second read pairs for Sample 349 AT, in fastq format. See Table 1 in text.349BT_R1First read pairs for Sample 349 BT, in fastq format. See Table 1 in text.349BT_R2Second read pairs for Sample 349 BT, in fastq format. See Table 1 in text.378BT_R1First read pairs for Sample 378 BT, in fastq format. See Table 1 in text.378BT_R2Second read pairs for Sample 378 BT, in fastq format. See Table 1 in text.