MDSINE2 Cross-Validation Analysis (Healthy Cohort)

MDSINE2 Inference Analysis files. This archive contains all output files from the cross-validation inference (with comparator analysis included) for Healthy cohort. (Both healthy and dysbiotic cohorts are required to run the Jupyter Notebook (`fig4_semisynthetic_v2_cache.ipynb`) on our MDSINE2_Paper repo. For the Dysbiotic cohort files, refer to https://zenodo.org/records/16915340. For the full project/source pipeline, refer to https://github.com/gerberlab/MDSINE2_Paper. The archive here was created using the command `tar --zstd -cvf`, and then split using the unix "split" command. To unpack these files, please use the following command: cat cross_validation_healthy.tar.zst.part* > cross_validation_healthy.tar.zst tar -I zstd -xvf cross_validation_healthy.tar.zst These files should be unpacked and placed in the paper repository directory (wherever you did `git clone`), so that the `datasets` directory is directly inside `MDSINE2_Paper` repository directory. ------------ Related zenodo records: https://doi.org/10.5281/zenodo.8208502 -- Full MDSINE2 inference on Healthy cohort https://doi.org/10.5281/zenodo.16915340 -- MDSINE2 Cross-Validation run (Dysbiotic cohort) https://doi.org/10.5281/zenodo.16915311 -- MDSINE2 semisynthetic dataset