Data from: A test of genomic modularity among life-history adaptations promoting speciation with gene flow

Filtered vcf file with genotype probabilitiesThis is a vcf file generated using the GATK unified genotyper, then filtered as describe in the paper. The PL field provides the phred-scaled and normalized genotype probabilities produced using the GATK model.PJM123.UG.GATK.all.filtered.HWE.vcfFile mapping barcodes and ids to population/phenotypecolumn 1 = inline barcode (5' end of the forward read), column 2 = sample id (sample id in the vcf file), column 3 = population_phenotype: Haw_L = Hawthorn late, Haw_E = Hawthorn early, Apple_L = Apple late, Apple_E = Apple earlyPJM_12_barcode_map.txt140109_I1135_FCC2U5MACXX_L6_PJM_1_1.fq.gzIllumina forward reads, lane 1140109_I1135_FCC2U5MACXX_L6_PJM_1_2.fq.gzIllumina reverse reads, lane 1140114_I456_FCC3JBKACXX_L1_PJM_2_F_1.fq.gzllumina forward reads, lane 2140114_I456_FCC3JBKACXX_L1_PJM_2_F_2.fq.gzIllumina reverse reads, lane 2