Additional file 4 of Microbiota members from body sites of dairy cows are largely shared within individual hosts throughout lactation but sharing is limited in the herd

Additional file 4. List of ASVs with abundances changing over time in oral, nasal, vaginal and milk microbiota, and list of ASVs with abundance changing with SM score category in milk microbiota as determined by a DESeq2 analysis. Effects are reported as log2 fold changeand adjusted P values.