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NGS Pipeline for SARS-CoV-2 Genomic Surveillance and Variant Analysis
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创建时间：
2025-12-07
相关数据集
Genomic surveillance of the Chikungunya Virus (CHIKV) in Northeast Brazil after the first outbreak in 2014
Abstract INTRODUCTION: We performed an epidemiological surveillance of the Chikungunya (CHIKV) lineages in Bahia after the 2014 East/Central/South African (ECSA) genotype outbreak. METHODS: Reverse-tr
DataCite Commons2021-03-25 更新70
Additional file 1 of INSaFLU-TELEVIR: an open web-based bioinformatics suite for viral metagenomic detection and routine genomic surveillance
Additional file 1. Benchmark of the INSaFLU-TELEVIR pipeline for virus detection (TELEVIR): Resources, Workflow details, Benchmark and Implementation. Additional file 2. Benchmarking of INSaFLU agains
DataCite Commons2024-08-15 更新60
Novel K. pneumoniae virulence plasmid sequences from "Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from south and southeast Asia."
Plasmid sequences generated from hybrid assembly of Illumina and Nanopore sequence read data. For full details please see the manuscript below. If you use these data please cite Wyres et al. Genomi
DataCite Commons2025-06-01 更新50
Additional file 1 of Use of a Plasmodium vivax genetic barcode for genomic surveillance and parasite tracking in Sri Lanka
Additional file 1. Details of the parasite isolates used in the study; ID number, year and location of collection, and clonality.
DataCite Commons2020-09-22 更新60
Foot-and-mouth disease virus strain:lineage Sea-97 | cultivar:Serotype A Genome sequencing and assembly. Foot-and-mouth disease virus strain:lineage Sea-97 | cultivar:Serotype A
Short read sequences from to study sub-consensus variant complexity of FMDV in acute and persistent natural infections
NIAID Data Ecosystem50
