Effect of nitrate on the transcriptome of the primary root tip in Medicago truncatula. Effect of nitrate on the transcriptome of the primary root tip in Medicago truncatula

Comparison of R108, a wild and nitrate sensitive genotype, with npf6.8-3, a mutant and insensitive line, deficient in the nitrate transceptor MtNPF6.8 (Pellizzaro et al, 2014 Plant Physiol). Overall design: Comparison between treated and untreated plants for the mutant and the wild type NOTE: The full original/unedited raw data files from multi-chip blades (slides) which contain complete information for various hybridizations are included as Series supplementary files. Experiments were technically as dual channel (eg, Cy3 and Cy5-labeled samples hybridized to the same array) but processed the results as though they are single channel (Cy3 and Cy5 signals are calculated, instead of Cy3/Cy5 ratios). Each raw data file generated from each Cy3 and Cy5-labeled pair is linked to the corresponding *_Cy5 sample records.