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3k PBMCs from a healthy donor

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DataCite Commons2025-02-14 更新2025-05-07 收录
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https://figshare.com/articles/dataset/3k_PBMCs_from_a_healthy_donor/28414916
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This dataset contains single-cell RNA sequencing (scRNA-seq) data of <b>3,000 peripheral blood mononuclear cells (PBMCs) from a healthy donor</b>, processed using the <b>10x Genomics Chromium platform</b>. The raw data was obtained from 10x Genomics and subsequently aligned using <b>Cell Ranger 8.0.1</b> with the <b>GENCODE Release 47 (GRCh38.p14) reference genome</b>.The dataset includes the following output files from the Cell Ranger pipeline:<b>filtered_feature_bc_matrix.h5</b> – Filtered count matrix in HDF5 format<b>filtered_feature_bc_matrix</b> – Filtered gene-barcode matrix in directory format<b>raw_feature_bc_matrix</b> – Raw gene-barcode matrix in directory format<b>raw_feature_bc_matrix.h5</b> – Raw count matrix in HDF5 formatThis dataset is valuable for researchers studying single-cell transcriptomics, immune cell profiling, and bioinformatics pipeline benchmarking.<b>File format:</b> HDF5 and Matrix Market (MTX)<br><b>Reference Genome:</b> GENCODE Release 47 (GRCh38.p14)<br><b>Processing Pipeline:</b> Cell Ranger 8.0.1<br>For any questions or collaborations, please feel free to contact the uploader.
提供机构:
figshare
创建时间:
2025-02-14
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