Additional file 2 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

Additional file 2: Table S1. The comparison of single-cell datasets generated from wheat and Arabidopsis root. Table S2. Top 100 of cluster-specific marker genes. Table S3. The expression of matrix of long noncoding RNAs for each cluster. Table S4. The expression of branch-dependent genes over the differentiated pseudo-time for epidermis/cortex and root hair. Table S5. The expression of branch-dependent genes over the differentiated pseudo-time for endodermis and epidermis/cortex. Table S6. Gene expression bias based on bulk RNA-seq of AK58 root. Table S9. GO enrichment of balance and unbanlance genes for each cluster. Table S10. Expression bias of marker genes in each cluster of AK58 root. Table S11. Hub genes of 185 regulons acrosss all clusters identified by SCENIC4 soft. Table S12. Hub genes of top5 regulons for each cluster analyzed by SCENIC4 soft. Table S13. The orthologous genes of wheat, rice and Arabidopsis thaliana. Table S14. Primers used for qPCR analysis and template synthesis for in situ RNA hybridization.