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Keywords: parallel sample
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WT and Aire-KO B6 MEChi RNAseq profiling. WT and Aire-KO B6 MEChi RNAseq profiling
Aire-sensitive genes exhibit a weak inclusion of alternative splicing events Overall design: Total RNA isolated by Trizol extraction from MHC-II high mTECs (pool of mice) was used to generate poly-A-s
NIAID Data Ecosystem60
Comparison of the transcriptome analysis of Tom[Low] and Tom[High] AT2 subpopulations in mice. Comparison of the transcriptome analysis of Tom[Low] and Tom[High] AT2 subpopulations in mice
Transgenic mice in two control (SftpCreERT2/+; Tomatoflox/flox) and Experimental (SftpCreERT2/+; Fgfr2bflox/flox; Tomatoflox/flox) groups were treated with tamoxifen (1mg/ml) in drinking water. The lu
NIAID Data Ecosystem20
Gene expression analysis of major histocompatibility complex II (MHCII) low and MHCII high, Tspan8-positive and Tspan8-negative medullary thymic epithelial cells.
RNA sequencing of Tspan8posMHCIIlo, Tspan8posMHCIIhi, Tspan8negMHCIIlo and Tspan8negMHCIIhi mTECs was performed in biological duplicates. Comparative gene expression profiling analysis of RNA-seq data
NIAID Data Ecosystem10
RNA-seq analysis on mTECs from Fezf2KO, AireKO and Chd4cKO mice
To gain insights into the difference in transcriptional programs regulated by Fezf2, Aire and Chd4, we performed RNA sequencing (RNA-seq) of mTECs from Fezf2-deficient, Aire-deficient and Chd4-deficie
NIAID Data Ecosystem20
Transcriptome analysis of cultured human alveolar epithelial type 2 cells. Transcriptome analysis of cultured human alveolar epithelial type 2 cells
We investigated whether in vitro expansion of human alveolar epithelial type II cells is possible. We found that human endogenous human alveolar epithelial type II cells can be cultured and passaged.
NIAID Data Ecosystem10



