File S1 - Comparative Analysis of Carbohydrate Active Enzymes in Clostridium termitidis CT1112 Reveals Complex Carbohydrate Degradation Ability

Table S1) Comparative analysis of the number of glycoside hydrolase (GH) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation 3 SD above mean; lightblue = deviation 4 SD above mean; blue = deviation 5 SD above mean; darkblue = deviation Table S2) Comparative analysis of the number of glycosyl transferases (GT) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium species. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation 3 SD above mean; lightblue = deviation 4 SD above mean; blue = deviation 5 SD above mean; darkblue = deviation Table S3) Comparative analysis of the number of polysaccharide lyase (PL) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation 3 SD above mean; lightblue = deviation 4 SD above mean; blue = deviation 5 SD above mean; darkblue = deviation Table S4) Comparative analysis of the number of carbohydrate esterase (CE) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation 3 SD above mean; lightblue = deviation 4 SD above mean; blue = deviation 5 SD above mean; darkblue = deviation Table S5) Comparative analysis of the number of carbohydrate binding module (CBM) families in selected Clostridium spp. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation 3 SD above mean; lightblue = deviation 4 SD above mean; blue = deviation 5 SD above mean; darkblue = deviation Table S6) Comparative analysis of predicted extracellular CAZymes, designated in the CAZy database, involved with lignocellulosic biomass hydrolysis within Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. (XLSX)