OpenScientist: Supplementary Case Study Data

Supplementary data for "OpenScientist: evaluating an open agentic AI co-scientist to accelerate biomedical discovery." This dataset contains research logs, knowledge states, provenance files, and generated figures for seven case studies spanning neurodegenerative disease transcriptomics, multiple myeloma genomics, survival proteomics, drug side effect analysis, and more. Each case study includes the full agent iteration log, configuration, and final report. Input datasets are included for three case studies where data sharing is permitted: case study 3 (neurofibrillary tangle transcriptomics), case study 4 (multiple myeloma RNA-seq), and case study 6 (drug side effect frequencies from clinical trials).