TABLE 2 in Botryosphaeriaceae on palms-a new species of Neodeightonia, N. chamaeropicola, and new records from diseased foliage of ornamental palms in Portugal

TABLE 2. Collection details and GenBank accession numbers of taxa included in the phylogenetic analyses.
Taxon current nameTaxon previous name 1Culture 2Status 3GenBank accession number 4 ITS tef1 tub2Botryosphaeria agavesCBS 133992ETJX646791JX646856-CBS 141505KX306750MT592030-MFLUCC 10-0051JX646790JX646855-B. corticisATCC 22927DQ299247EU673291-CBS 119047ETDQ299245EU017539-CBS 119048DQ299246EU017540-B. dothideaCBS 110302AY259092AY573218-CBS 110484MT587330AY343350-CBS 115476ETAY236949AY236898-CBS 121769EU101303EU101348N/ACDP 1567OQ996237OR233674N/ACERC 2298KX278002KX278107-CGMCC 3.17723KT343254KU221233-GZCC 16-0013KX447675KX447678-MFLUCC 13-0202MT177925MT454011-MFLUCC 16-1304MT177920MT454006N/AMFLUCC 16-1312MT177923MT454009N/AB. fabicercianaCBS 127193THQ332197HQ332213-CMW 14009DQ316084MT592032-CMW 27121HQ332198HQ332214-B. kuwatsukaiCBS 135219ETKJ433388KJ433410N/ACGMCC 3.18007KX197074KX197094-CGMCC 3.18008KX197075KX197095-B. osmanthiGUCC 21433TOL854215OP650906-GUCC 21433.1OL854216OP650907-B. puerensisCSF6052TMT028569MT028735-B.qingyuanensisCERC 2946TKX278000KX278105-CERC 2947KX278001KX278106-B.ramosaCBS 122069TEU144055EU144070-CERC 1999KX277988KX278093-CERC 2001KX277989KX278094-B.salicicolaGUCC 21230TOL854218OP669379-GUCC 21230.1OL854219OP669380-B.scharifiiCBS 124703TJQ772020JQ772057N/AIRAN 1543CJQ772019JQ772056N/ADiplodia africanaCBS 120835TEF445343EF445382-STE-U 5946EF445344EF445383N/ADi. agrifoliaCBS 132777TJN693507JQ517317N/ACBS 132779JQ411411JQ512120-Di. fraxiniCBS 136010NTKF307700KF318747-CPC 34847MT587346MT592051-Di. malorumBL 127KF307717KF318764N/ACBS 124130ETGQ923865GQ923833-Di. mutilaCAP 062AY259093AY573219-CBS 121862KX464093KX464567-CBS 125.37MT587355MT592060-CBS 136014ETKJ361837KJ361829-CDP 0088OQ996219OR233679N/ACPC 29891MT587360MT592066-Di. neojuniperiCBS 138652TKM006431KM006462-CPC 22754KM006432KM006463N/ADi. olivarumCAP 257GQ923874GQ923842N/ACBS 121887TEU392302EU392279-Di. rosulataCBS 116470TEU430265EU430267-CBS 116472EU430266EU430268-Di. subglobosaCAP 302GQ923855GQ923823-CBS 124133TGQ923856GQ923824-Dothiorella acacicolaCBS 141295TKX228269KX228376N/ADo. acericolaHNXX 032KY385661KY393212-KUMCC 18-0137TMK359449MK361182N/ADo. alpinaGCMCC 3.18001TKX499645KX499651N/ADo. brevicollisCBS 130411TJQ239403JQ239390-CMW 36464MT587395MT592107-Do. citricolaCBS 124729TEU673323EU673290-CMW 36462MT587397MT592109-ICMP 16827EU673322EU673289-Do. diospyricolaCBS 145972TMT587398MT592110-Do. dulcispinaeCBS 130413TJQ239400JQ239387-CMW 25406EU101299EU101344-CMW 25407EU101300EU101345-Do. iranicaCBS 124722TKC898231KC898214-Do. lampangensisMFLUCC 18-0232TMK347758MK340869-Do. longicollisCBS 122068TEU144054EU144069-CMW 26164EU144052EU144067-CMW 26165EU144053EU144068-Do. magnoliaeCFCC 51563TKY111247KY213686N/ACFCC 51564KY111248KY213687N/ADo. mangifericolaCBS 124726MT587407MT592119N/ACBS 124727TKC898221KX464614N/ACMW 25389KF766227EU101335-Do. plurivoraCBS 124724TKC898225KC898208-Do. striataCBS 124731TEU673321EU673288-DAR 80992KJ573643KJ573640-ICMP 16819EU673320EU673287-Do. tectonaeMFLUCC 18-0382TKM396899KM409637-Do. thailandicaCBS 133991TJX646796JX646861-Do. uruguayensisCBS 124908EU080923EU863180-Do. vinea-gemmaeCPC 29689MT587417MT592129-DAR 81012TKJ573644KJ573641-Do. viticolaCBS 117007AY905556KX464623-CBS 117008AY905557AY905560-CBS 117009TAY905554AY905559-CDP 1010OQ996228OR233683N/ACDP 1381OQ996230OR233684N/ACDP 1513OQ996234OR233685N/ACDP 1813OQ996240OR233686N/ACDP 1815OQ996241OR233687N/ACMW 37930JX283732JX283745-CMW 37931JX283733JX283740-CMW 37933JX283735JX283743-CPC 33136MT587418MT592130-CPC 33257MT587419MT592131-DAR 80529HM009376HM800511-DAR 80531HM009378HM800513-STE-U 5048AY343373AY343336-Do. yunnanaCGMCC 3.17999TKX499643KX499649N/ACGMCC 3.18000KX499644KX499650N/ALasiodiplodia theobromaeCBS 164.96NTAY640255AY640258-L. tropicaCGMCC 3.18477TKY783454KY848616-Macrophomina phaseolinaCBS 205.47ETKF951622KF951997N/AM. pseudophaesolinaCPC 21417TKF951791KF952153-Neodeightonia chamaeropicolaCDP 1446TOQ996231OR233669N/ACDP 1447OQ996232OR233670N/ACDP 1512OQ996233OR233671N/ACDP 1566OQ996236OR233673N/ACMIB-151MN060978N/AN/ADP064BHQ443209N/AN/ANeod. licurensisCOAD1780TKP165429KP165430-Neod. microsporaMFLUCC 11-0483TKU940110N/AN/AMFLUCC 11-0504KU940111N/AN/ANeod. palmicolaMFLUCC 10-0822THQ199221N/AN/AMFLUCC 10-0823HQ199224N/AN/ANeod. planchoniaeMFLUCC 17-2427MK347755N/AN/ANeod. arengaeMFLUCC 19-9077MZ262519MZ268009N/ANeod. arengaeNCYUCC 19-0144MZ262520MZ268010N/ANeod. arengaeZHKUCC 21-0074MZ647513MZ669855N/ANeod. arengaeZHKUCC 21-0075MZ647514MZ669856N/ANeod. arengaeZHKUCC 21-0076MZ647515MZ669857N/ANeod. phoenicumAMNOL589157N/AN/ACBS 122528TKF766198EU673309-CBS 123168EU673339EU673308-CBS 169.34EU673338EU673307-CDP 0281OQ996220N/AN/ACDP 0284OQ996221N/AN/ACDP 0290OQ996222N/AN/ACDP 0593OQ996224N/AN/ACDP 0745OQ996225N/AN/ACDP 0771OQ996226OR233667N/ACDP 0774OQ996227OR233668N/AFK6JX456475N/AN/AMFLUCC 22-0061ON707690N/AN/AMycoMP1OM920990N/AN/APLM-667AMG321227MG309735N/APLM-886AMG321229MG309737N/APLM-903AMG321230MG309738N/ANeod. rattanicaMFLUCC 15-0313KX646358KX646361N/AMFLUCC 15-0712TKX646357KX646360N/ANeod. rattanicolaMFLUCC 15-319TKX646359KX646362N/ANeod. septataGZAAS 22-0068ON716185ON759744N/AMFLUCC 22-0004TON716184ON759743N/ANeod. sp.PLM-367MG321231MG309739N/APLM-610MG321232MG309740N/APLM-744AMG321233MG309741N/APLM-854AMG321234MG309742N/APLM-877AMG321235MG309743N/ANeod. subglobosaCBS 448.91TKF766199EU673306-MFLUCC 11-0388KU940114N/AN/AMFLUCC 11-0482KU940112N/AN/AMFLUCC 11-0607KU940113N/AN/AMFLUCC 22-0005ON716186ON759745N/ANeofusicoccum arbutiCBS 116131TAY819720KF531792KF531793CMW 13455AY693976AY693977KX464923Neof. australeCBS 110865AY343408KX464661KX464937CBS 112877AY343385AY343346MT592654CBS 125786MH863758MT592170MT592662CBS 130996MT587458MT592171MT592663CDP 0075OQ996218OR233666N/ACMW 6837TAY339262AY339270AY339254CPC 33052MT587473MT592186MT592678Neof. brasilienseCMM 1285JX513628JX513608KC794030CMM 1338TJX513630JX513610KC794031Neof. buxiCBS 116.75TKX464165KX464678N/AUPSC 1738KX464164KX464677KX464954Neof. cordaticolaCBS 123634TEU821898EU821868EU821838CMW 14056EU821903EU821873EU821843Neof. cryptoaustraleB012OQ176234OQ236715OQ181395B029OQ380731OQ401619OQ401621Neof. stellenboschianumCBS 110864AY343407AY343348KX465047Neof. stellenboschianumCBS 110866MT587518MT592242MT592734CBS 1122813TFJ752742FJ752713FJ752756Neof. stellenboschianumCBS 189.28MT587521MT592246MT592738CDP 1565OQ996235OR233672OR233690CDP 1968OQ996242OR233676OR233691Neof. stellenboschianumCMW 13986DQ316085MT592243MT592735CMW 20738PTFJ752740FJ752710FJ752754CMW 23786FJ752744FJ752714FJ752753CMW 42483KP860866KP860709KP860786Neof. stellenboschianumCPC 28950MT587522MT592247MT592739Neof. stellenboschianumCPC 35286MT587524MT592249MT592741Neof. eucalypticolaCBS 115679TAY615141AY615133AY615125CMW 6217AY615143AY615135AY615127Neof. eucalyptorumCBS 115791RAF283686AY236891AY236920CBS 145975MT587477MT592190MT592682Neof. grevilleaeCBS 129518TJF951137N/AN/ANeof. hellenicumCERC 1947TKP217053KP217061KP217069CERC 1948KP217054KP217062KP217070Neof. hongkongenseCERC 2967KX278050KX278155KX278259CERC 2973TKX278052KX278157KX278261Neof. illiciiCGMCC 3.18310TKY350149N/AKY350155CGMCC 3.18311KY350150KY817756KY350156Neof. kwambonambiensesCBS 115184AF452525FJ150711N/ACBS 123639TEU821900EU821870EU821840Neof. lumnitzeraeCMW 41228MT587480MT592193MT592685CMW 41469TKP860881KP860724KP860801Neof. luteumCBS 562.92TKX464170KX464690KX464968CDP 0033OQ996216OR233664N/ACDP 0038OQ996217OR233665N/ACDP 1568OQ996238OR233675N/ACDP 1969OQ996243OR233677N/ACDP 2026OQ996244OR233678N/ACMW 14071DQ316088MT592196MT592688CMW 41365NR_147360MT592206MT592698CPC 32247MT587485MT592199MT592691CPC 32482MT587494MT592209MT592701CPC 32647MT587496MT592211MT592703Neof. macroclavatumCBS 118223TDQ093196DQ093217DQ093206Neof. mangiferaeCBS 118531RAY615185DQ093221AY615172CBS 118532RAY615186DQ093220AY615173Neof. mediterraneumCBS 113089KX464199KX464727KX465014CBS 121718TGU251176GU251308GU251836Neof. microconidiumCBS 118821MT587497MT592212MT592704CERC 3497TKX278053KX278158KX278262Neof. nonquaesitumCBS 126655TGU251163GU251295GU251823PD 301GU251164GU251296GU251824Neof. occulatumCBS 128008TEU301030EU339509EU339472CBS 519.74MT587499MT592214MT592706Neof. parvumALG 1KJ657702KJ657715KX505915ATCC 58191TAY236943AY236888AY236917CBS 118832MT587501MT592216MT592708CBS 139672MT587446MT592156MT592646CDP 0382OQ996223OR233681OR233688CDP 1380OQ996229OR233680OR233689MFLUCC 15-0900KY856755KY856754N/ASTE-U 5049AY343474AY343365MT592643Neof. pennatisporumMUCC 510TEF591925EF591976EF591959Neof. pistaciaeCBS 595.76ITKX464163KX464676KX464953Neof. podocarpiCBS 115065MT587507MT592222MT592714CBS 131677TMT587508MT592223MT592715Neof. protearumCBS 113071FJ150700MT592231MT592723CBS 114176TAF452539KX464720KX465006Neof. rapaneaeCBS 145973TMT587511MT592226MT592718CPC 32578MT587512MT592227MT592719Neof. ribisCBS 115475TAY236935AY236877AY236906UPSC 3145MT587514MT592229MT592721Neof. sinenseCGMCC 3.18315TKY350148KY817755KY350154Neof. sinoeucalyptiCERC 2005TKX278061KX278166KX278270CERC 3415KX278063KX278168KX278272Neof. terminaliaeCBS 125263TGQ471802GQ471780KX465052CMW 26683GQ471804GQ471782KX465053Neof. ursorumCBS 122811TFJ752746FJ752709KX465056CMW 23790FJ752745FJ752708KX465057Neof. variabileCBS 143480TMH558608N/AMH569153CMW 37745MH558610MH576586MH569155Neof. viticlavatumCBS 112878TAY343381AY343342KX465058STE-U 5041AY343380AY343341KX465059Neof. vitifusiformeCBS 110887TAY343383AY343343KX465061STE-U 5050AY343382AY343344KX465008Sardiniella celtidisGZCC 19-0248MZ781427MZ852500N/AMFLUCC 17-0981TMF443249MF443248N/AS. ellipticaCGMCC 3.20349TMZ781429MZ852502N/AGZCC 19-0245MZ781431MZ852504N/AS. guizhouensisCGMCC 3.19222TMW886228MZ231048N/AGZCC 19-0094MW886229MZ231049N/AS. urbanaBL 180KX379677KX379678N/ABL 181KX379680KX379681N/ABL 182KX379683KX379684N/ACBS 141580TKX379674KX379675N/ACDP 1658OQ996239OR233682N/A
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1 Taxon previous name is noted if different from current name for taxa which were synonymized in the present study.
2 Acronyms of culture collections, ALG: Personal culture collection A. Berraf-Tebbal; AR: Collection of Systematic Mycology and Microbiology Laboratory; ATCC: American Type Culture Collection, Virginia, USA; BL: Personal number of B.T. Linaldeddu; CAP: Personal culture of A.J.L. Phillips; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands; CDP: Culture Collection of D.S. Pereira, housed at the Lab Bugworkers | M&B-BioISI | Tec Labs – Innovation Centre, Faculty of Sciences, University of Lisbon, Lisbon, Portugal; CERC: Culture collection of China Eucalypt Research Centre, Chinese Academy of Forestry, ZhanJiang, GuangDong, China; CFCC: China Forestry Culture Collection Center, Beijing, China; CGMCC: China General Microbiological Culture Collection Center; CMIB: Coleções de Culturas Microbiológicas da Rede Paranaense (CMRP); CMM: Culture Collection of Phytopathogenic Fungi “Prof. Maria Menezes”, Universidade Federal Rural de Pernambuco, Recife, Brazil; CMW: Tree Patholgy Co-operative Program, Forestry and Agricultural Biotechnology Institute, University of Pretoria, South Africa; COAD: Colecao Octavio de Almeida Drumond, Universidade Federal de Viçosa, MG, Brazil; CPC: Working collection of P.W. Crous, housed at CBS; CSF: Culture Collection from Southern Forests, ZhanJiang, GuangDong Province, China; DAR: Plant Pathology Herbarium, Orange Agricultural Institute, Forest Road, Orange. NSW 2800, Australia; GUCC: Guizhou University Culture Collection; GZAAS, Guizhou Academic of Agriculture Sciences, Guizhou, China; GZCC: Guizhou Academy of Agricultural Sciences Culture Collection, GuiZhou, China; ICMP: International Collection of Microorganisms from Plants, Landcare Research, Aukland, New Zealand; IRAN: Iranian Fungal Culture Collection, Iranian Research Institute of Plant Protection, Iran; KUMCC: Culture Collection of Kunming Institute of Botany, Kunming, China; MFLUCC/MFLU: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; MUCC: Murdoch University Culture Collection, Murdoch, Australia; NCYUCC: National Chiayi University Culture Collection, Taiwan; PD: Culture collection, University of California, Davis, USA; STE-U: Culture collection of the Department of Plant Pathology, University of Stellenbosch, South Africa; UPSC: Uppsala University Culture Collection of Fungi, Botanical Museum University of Uppsala, Uppsala, Sweden; ZHKUCC: University of Agriculture and Engineering Culture Collection, China.
3 Status of the strains, ET: ex-epitype, IT: ex-isotype, NT: ex-neotype, PT: ex-paratype, R: representative, T: ex-type.
4 Newly generated sequences are in bold; N/A: sequences not available; –: sequences not used in the analyses; ITS: partial cluster of nrRNA genes, including the nuclear 5.8S rRNA gene and its flanking internal transcribed spacer regions ITS1 and ITS2; tef1: partial translation elongation factor 1-alpha gene; tub2: partial beta-tubulin gene.