Table S1: HARRIS_HYPOXIA gene set and REACTOME_AUTOPHAGY gene set; Table S2: Hypoxia phenotype score and autophagy phenotype score of each PTC sample in the TCGA-THCA dataset; Table S3: The qPCR prime
Somatic mutations identified by WES, nonsilent and null mutations identified by MutSigCV in WES, MSK-IMPACT gene list, and the list of genes used for Oncoprint.
