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Supplementary Data

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https://figshare.com/articles/Supplementary_Data/6508205/1
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<b>Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury - Supplemetary Data</b> <br> <br> S. Data 1: Novel LncRNAs in mouse and rat, in syntenically conserved regions between human, mouse and rat. S. Data 2: Novel LncRNAs in mouse DRG antisense of orthologous genes in mouse and rat. S. Data 3: Novel LncRNAs in rat DRG antisense of orthologous genes in mouse and rat. S. Data 4: Neuron sub-type specificity of ENSEMBL genes and novel LncRNAs. Neuron sub-type index is 1. MHN, 2. MHN (MI, IS), 3. C-LTMR, 4. MHN (IS), 5. MHN (IS), 6. MHN, 7. MHN (NS), 8. MR, 9. MHN, 10. MR. Average log2 expression holds the average expression in the neuron sub-type where the gene or LncRNAs was higher expressed. Expression SEM hold the standard error of the mean for the average expression estimator. S. Data 5: DE analysis results for IPSC-derived sensory neurons vs IPSC. Results are DESeq2 determined for the whole gene set of ENSEMBL genes and novel LncRNAs. Experimental design is ~ cell_line*condition. S. Data 6: Expression data for all antisense LncRNAs in IPSC-derived sensory neurons vs IPSC. S. Data 7: Expression data for all intergenic LncRNAs in IPSC-derived sensory neurons vs IPSC. S. Data 8: Expression data for all LncRNAs antisense of pain genes in IPSC-derived sensory neurons vs IPSC. S. Data 9: Expression data for all intergenic LncRNAs adjacent to pain genes in IPSC-derived sensory neurons vs IPSC. S. Data 10: Novel LncRNAs in human IPSC and mouse, in syntenically conserved regions between human, mouse and rat. S. Data 11: Novel LncRNAs in human IPSC antisense of orthologous genes in human and mouse. S. Data 12: DE analysis results for rat DRG SNT vs Sham. Results are DESeq2 determined for the whole gene set of ENSEMBL genes and novel LncRNAs. Experimental design is ~ condition. S. Data 13: Expression data for all antisense LncRNAs in rat DRG SNT vs Sham. S. Data 14: Expression data for all intergenic LncRNAs rat DRG SNT vs Sham. S. Data 15: DE analysis results for BALB/c mouse DRG SNI vs Sham. Results are DESeq2 determined for the whole gene set of ENSEMBL genes and novel LncRNAs. Experimental design is ~ sex + strain*condition. S. Data 16: DE analysis results for B10.D2 mouse DRG SNI vs Sham. Results are DESeq2 determined for the whole gene set of ENSEMBL genes and novel LncRNAs. Experimental design is ~ sex + strain*condition. S. Data 17: Expression data for all antisense LncRNAs in mouse DRG SNI vs Sham. S. Data 18: Expression data for all intergenic LncRNAs mouse DRG SNI vs Sham. <br>
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2018-06-13
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