Detection of pathogens and AMR genes with CZ ID pipeline

NIAID Data Ecosystem2026-05-01 收录

病原体检测

抗性微生物分析

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1086943 数据链接链接失效反馈

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资源简介：

Sequencing data associated with case studies used to demonstrate the application of CZ ID AMR module to mNGS and WGS data

创建时间：

2024-03-12

Additional file 8 of Real-time fluorometric and end-point colorimetric isothermal assays for detection of equine pathogens C. psittaci and equine herpes virus 1: validation, comparison and application at the point of care

病原体检测

即时护理

Additional file 8. Clinical samples testing. In this table, we present (paired) results of our three isothermal assays compared to reference qPCR assays when testing the same samples. On sheet 1 are r

DataCite Commons2021-08-20 更新90

Primers and probes for LAMP-LFB detect of C . perfringens .

病原体检测

分子诊断

Primers and probes for LAMP-LFB detect of C. perfringens.

NIAID Data Ecosystem40

Symptoms from data collected from clinic visit for 116 patients with S. Typhi bacteremia from Kibera and Lwak (from whom clinical data were available) compared with other patients with blood cultures processed.

伤寒症状分析

病原体检测

*pS. Typhi isolated from blood culture.**pS. Typhi isolated from blood culture.***p0.05 when compared all patients without S. Typhi isolated from blood culture.&p S. Typhi.

Figshare2015-12-02 更新10

Additional file 5 of A comprehensive approach for microbiota and health monitoring in mouse colonies using metagenomic shotgun sequencing

微生物群监测

病原体检测

FELASA list of pathogens investigated in the course of the study: comparison between standard vs NGS analyses. Each different line represents the species included in the FELASA list of pathogens. For

DataCite Commons2021-07-30 更新60

Nucleotide sequences of the gBlocks used as positive controls for T. orientalis qPCR.

分子诊断质量控制

病原体检测

Nucleotide sequences of the gBlocks used as positive controls for T. orientalis qPCR.

Figshare2025-04-01 更新20