The state of Medusozoa genomics: supplementary material

Supplementary Material of the review manuscript entitled "State of Medusozoa genomics: current evidence and future challanges" <br><b>Supplementary file S1. Dataset 1. </b>Genome report sheet (version 1.2022). This report presents information from public databases, project-based databases, published articles. New releases of this sheet can be published and it can be uploaded upon other author's request.<br><b>Supplementary file S2. Dataset 2.</b> Command line to retrieve data from NCBI and to generate new results. Presented as html notebooks and plain scripts. Written in bash<b>Supplementary file S3. Dataset 3. </b>Scripts used for graph construction. Presented as html notebooks, jupyter notebooks, and plain scripts. Written in python &gt;3.6<b>Supplementary file S4. Table S1. </b>Species information considering chromosome number, genome size and genomic datasets.<b>Supplementary file S5. Tables S2-8 -</b> All information used for constructing graphs presented in this work. Includes summary information of Figure 2 (table S2), genome resources used in this study (table S3), assembly statistics for Figure 3A (table S4), genome features of Figure 3B (table S5, S6) and BUSCO results for Figure 4 and Supplementary figure S1 (tables S7, S8).<b>Supplementary file S6. Figure S1. </b>BUSCO Eukaryota gene distribution in Medusozoa assemblies. Each column corresponds to a gene and each row an assembly. Information used for this graph is available at Supplementary file S4 Table S8.<b>Supplementary file S7 - Dataset 4. </b>Original metadata from NCBI.<b>Supplementary file S8 - Dataset 5. </b>Original results from AGAT and Galaxy server (BUSCO). Directory structure coincident with directories specified in scripts for graphs.<b>Supplementary file S9 - Dataset 6. </b> Figures in vectorial format