Supplement 1. MATLAB computer code for analyses of experiment 1.

File List Woody_et_al_Expt1.m -- Main program.<br> expt1funct.m -- State-space model returning ln likelihoods.<br> expt1approxSEfunct.m -- Function to calculate approximate SE of parameter values.<br> woody826.txt -- Text file containing experimental data.<br> w826_912segs.txt -- Text file for estimates of segment-to-segment measurement error.<br> woody826meas.txt -- Text file containing segment standard errors.<br> estWoody_Expt1.txt -- Text file containing ML parameter estimates.<br> Woody_et_al_Expt1.zip -- All files together. Description The Woody_et_al_Expt1.m program in MatLab performs the state-space analysis of the experiment 1 as described in the <i>Materials and Methods</i> of the main article. Woody_et_al_Expt1.m calls two programs, expt1funct.m and expt1approxSEfunct.m, and uses data from the text files.