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Indices of the noisy trials
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2017-06-27
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Cleaning process - effectively removed all cross-talk
BLAST pair-wise results among the 10 MAST species involved before and after the cleaning. Combining the size of the alignment among genomes and its mean similarity, we calculated the percentage of eac
Figshare2021-01-09 更新70
Table S1 - Abundant Human DNA Contamination Identified in Non-Primate Genome Databases
A) NCBI trace archive sequences used for AluY Clustal alignment (Figure 1A). B) Complete list of NCBI non-primate trace archive databases identified as contaminated. C) Sequences in non-primate NCBI g
Figshare2015-12-02 更新50
The distribution of total and distinct tags.
Clean tags: tags after filtering dirty tags (low quality tags) from raw data.Distinct tags: different kinds of tags.Unambiguous tags: the clean tags after removing tags mapped to reference sequences f
Figshare2015-12-02 更新30
Table showing the counts of genomes before and after filtering based on for Somalia, Bhutan, Hungary, Iran, and Nepal data sets.
Table showing the counts of genomes before and after filtering based on for Somalia, Bhutan, Hungary, Iran, and Nepal data sets.
NIAID Data Ecosystem70
Supplementary Materials from Jennifer E. Gleason's PhD thesis
Supplementary files for Jennifer Erin Gleason's PhD thesis. Appendix 1 – A word document elaborating on data cleaning protocols post-bioinformatic processing using metabaR. Appendix 2 – The R
NIAID Data Ecosystem30
