Tn5 transposase-mediated library preparation of single-cell cDNAs for RNA-seq
收藏干细胞与再生医学数据中心2022-02-20 更新2024-03-06 收录
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Deep sequencing of single cell-derived genomic DNA and/or cDNAs brings novel insights into oncogenesis and embryogenesis. However, traditional library preparation for RNA-Seq requires multiple steps, including shearing the target DNA/RNA and following sequential enzymatic reactions, which result in consequent sample loss and stochastic variation at each step. Such variation may significantly affect the output from sequencing. We have found that a new technique of library preparation using hyperactive Tn5 transposase for the next-generation sequencer of Illumina's platform provided high-quality libraries from 100ng of short-length (average 700~800 bp) single-cell level cDNA. This new method reduced the number of steps in the protocol, which resulted in improved reproducibility and reduced variation among the specimens.
提供机构:
Barts and The London School of Medicine and Dentistry, Queen Mary University of London
创建时间:
2022-02-20



