Supplementary data Common chaffinch genome assembly

<br>Supplementary data from Chromosome-level genome assembly of the common chaffinch (Aves:<i>Fringilla coelebs</i>): a valuable resource for evolutionary biology.<br>We include the common chaffinch (<i>Fringilla coelebs</i>) genome assembly, as well as the supplementary methods, figures, tables and files described in the article.<br>Supplementary Materials<b> </b><br><b>Supplementary Methods:</b>-Sequencing and genome assembly pipeline.-Assembly quality control.-Gene annotation and function prediction.-Non-coding RNA prediction and identification.<b>TableS1. </b>Assembly quality statistics<br> <b>TableS2. </b>Classification of repeats of the common chaffinch assembly.<b></b> <b>Figure S1. </b>Screen for possible contamination using BlobTools.<b></b><b>Figure S2. </b>Distribution of microsatellites motif lengths.<br><b>Figure S3. M</b>icrosatellite count and sequence length correlation.<br> <br><b>Supplementary Files:</b><br> <b>File S1.</b> Microsatellites: -Microsatellites and their genomic position.<br><b></b> -Length distribution of microsatellites. -Frequency of occurrence of microsatellites on every scaffold. <b>File S2.</b> Genome annotation in general feature format. <b>File S3.</b> Information table about predicted genes with SwissProt, the Zebra finch genome, InterPro and GO terms. <b>File S4.</b> Predicted output of tRNA-SE scan. <b>File S5.</b> Sequence and structure of tRNAs. <b>File S6.</b> Predicted ncRNA types.<br>Protein fasta fileCds fasta file<br>