Data used in: Biological traits interact with human threats to drive extinctions: A modelling study
收藏DataCite Commons2022-02-18 更新2024-07-29 收录
下载链接:
https://figshare.com/articles/dataset/Data_used_in_Biological_traits_interact_with_human_threats_to_drive_extinctions_A_modelling_study/19195838/1
下载链接
链接失效反馈官方服务:
资源简介:
<b>Data and scripts required to run the simulations and statistical analyses of the following publication:</b>https://doi.org/10.1016/j.ecoinf.2022.101604<br><br><b>Brief summary:</b>The simulation consists of abstract organisms that compete in virtual landscapes and face human threats such as direct killing, habitat loss, fragmentation and degradation, and competing invasive organisms. We analyse how four different traits of organisms (body size, maturity age, fecundity, dispersal ability) respond to the different threats through natural selection.<br>The model was developed in Netlogo (<b>logotraits19.nlogo</b>). For reproducibility's sake, simulations within netlogo are made through R scripts (<b>Logotraits_main.R </b>and <b>Logotraits_interface.R</b>). Running these scripts generates two datasets, one containing simulations with standard parameter values (<b>SA_dataset.csv</b>) and the other containing the results of the robustness analyses (<b>RA_dataset.csv</b>). These are analysed within R with the script <b>Data_analysis.R</b>.<br><b>Instructions</b>:***To run the simulations***1. Either run the script <b>Logotraits_main.R</b> or2. double click the <b>logotraits19.nlogo</b> fileBoth options require R>4.0.1 and NetLogo 6.0.0> installed. The script <b>Logotraits_interface.R</b> is an auxilliary file only and does not need to be open, unless the user wants to change the simulation parameters.<br>***To repeat the statistical analyses shown in the paper***1. Run the script <b>Data_analysis.R</b>. Follow the instructions wihtin the script (such as making sure that <b>SA_dataset.csv</b> and <b>RA_dataset.csv</b> are in the working directory).<br>For any doubts or suggestions you may contact the corresponding author (Filipe Chichorro).
提供机构:
figshare
创建时间:
2022-02-18



