Code and data for: Variability, drivers, and utility of genetic diversity-area relationships in terrestrial vertebrates

Code and data for: Genetic diversity-area relationships are governed by population structureAuthors: Chloé Schmidt, Sean Hoban, Deborah M. Leigh, Walter Jetz, Colin J. GarrowayCode also available on Github: https://github.com/chloewsch/GDAR<br>File descriptions:1. R scripts: Scripts for data compilation and analysis (in order of use)<br>2. GDAR_env_figs.Rdata: R environment object including data needed to run scripts3. genotypes_files_FS.rds: genotype data saved as a list of genind objects (adegenet package)4. zfst_long_se.rds: a saved R object produced in script 1.<br>5. mammal_traits.csv: trait data for species included in this analysisColumn descriptions:filename: name of file containing genotypesspecies: Genus_speciesindividuals: number of individuals samplednum_sites: number of sites (locations) sampledglobal_fst: estimated global FST (population differentiation)zAC, zAR, zGD: estimated scaling values (z) for allele count (AC), allelic richness (AR), and gene diversity (GD)zACse, zARse, zGDse: standard errors for scaling values (z)class, uid, family, genus, order: other taxonomic informationmass_g, log_mass: species mass in grams, and log10 of this valuerange_area_km2, log_range: species range area in square kilometers, and log10 of this valuemean_HR_km2, log_HR: species mean home range area in square kilometers, and log10 of this valuearea_km2, log_area: area of sample extent (per study) in square kilometers, and log10 of this value<br>6. mpg_test_data.csv: trait data for mammal species from the MacroPopGen database (https://figshare.com/articles/dataset/MacroPopGen_Database_Geo-referenced_population-specific_microsatellite_data_across_the_American_continents/7207514/3?file=23392853)Column descriptions:species_ref: species binomial and MacroPopGen reference IDspecies: Genus_speciesorder, family, genus: other taxonomic informationRefID: MacroPopGen reference IDglobal_fst: global FST value per study/species combinationmass_g, log_mass: species mass in grams, and log10 of this valuerange_area_km2, log_range: species range area in square kilometers, and log10 of this valuemean_HR_km2, log_HR: species mean home range area in square kilometers, and log10 of this valuearea_km2, log_area: area of sample extent (per study) in square kilometers, and log10 of this value