Phylogenetic analysis input files

Input files for phylogenetic analysis of mergansers and related taxa from Rawlence et al. (2024), Zoological Journal of the Linnean Society:<b>1.BEAST_input_alignment.nex</b> = multiple sequence alignment file (including partitions) used to create BEAST XML file in BEAUti.<b>2.BEAST_analysis_input.xml</b> = XML file containing data and all parameters for analysis in BEAST v1.8.4.<b>3.IQ-TREE_input_alignment.phy</b> = multiple sequence alignment file used as input for IQ-TREE analyses.<b>4.IQ-TREE.partitions.txt</b> = nucleotide partitions used as input for IQ-TREE analyses.<b>5.IQ-TREE.alternative-topologies.txt</b> = alternative tree topologies compared using KH, SH, and AU tests in IQ-TREE. Reference: Rawlence et al. (2024) "Ancient mitogenomes reveal evidence for the Late Miocene dispersal of mergansers to the Southern Hemisphere", Zoological Journal of the Linnean Society (https://doi.org/10.1093/zoolinnean/zlae040).