Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Kidney, v1.4
收藏DataCite Commons2025-09-11 更新2024-07-13 收录
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https://entity.api.hubmapconsortium.org/redirect/HBM636.MXKP.682
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[Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) tables](https://humanatlas.io/asctb-tables) aim to<br>capture the nested *part_of* structure of anatomical human body parts, the typology of cells, and biomarkers used to<br>identify cell types. The tables are authored and reviewed by an international team of experts. The kidney ASCT+B<br>tables are generated from a variety of publicly available human kidney datasets and from data generated by HuBMAP and<br>KPMP consortia. Most of the markers listed are observed in more than one study or orthogonally validated. Note that<br>these are predicted markers and a single marker to annotate a cell type is not likely sufficient or specific.<br>Therefore, these are just a guide, more accurate annotation should be done using the entire set of enriched genes in a<br>cluster. The cell types shown here are at much higher granularity, although general markers for many of the<br>structures are also shown. There is a tradeoff in uncertainty of cell type annotation with higher granularity and as<br>spatial validation approaches become more robust we will be accordingly revising these.
提供机构:
HuBMAP
创建时间:
2023-12-16



