Clostridioides difficile prophage census: derived data and analysis code for a census of 241 complete genomes
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Derived tables, prophage nucleotide sequences, figure sources and analysis code accompanying the manuscript 'Species-wide prophage diversity and defence-cargo enrichment in Clostridioides difficile: a census of 241 complete genomes' (submitted to Microbial Genomics). The dataset comprises 241 complete RefSeq genomes, 399 primary-catalogue prophage regions in 130 nucleotide clusters, 1,447 protein families and the associated statistics.
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2026-11-02



