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Comparison of DNA extraction kits in characterizing symbiotic microbial communities in ascidians

NIAID Data Ecosystem2026-05-26 收录

微生物组方法学

海洋共生微生物

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP125054 数据链接链接失效反馈

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资源简介：

Comparison of DNA extraction kits in characterizing ascidian microbiomes

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创建时间：

2018-12-01

微生物组方法学

16SrRNA测序偏差

we evaluated the bias of nested PCR in estimating microbial diversity and community structure by comparing it with standard PCR. We investigated the influence of microbial diversity (relatively low vs

NIAID Data Ecosystem50

DNA extraction protocols do not cause differences in ant-associated bacterial 16S rRNA community profiles. Targeted Locus (Loci). ant metagenome

微生物组方法学

蚂蚁共生菌群

In this study, we examine several commonly used protocols for extracting bacterial DNA from ants to assess the biases inherent in each method. Bacterial community composition recovered using Illumina

NIAID Data Ecosystem50

Total number of sequences obtained via three pyrosequencing methods using one lane of 16th region.

16SrRNA测序

微生物组方法学

All data are given as an average value of technical replicates (duplicates (n = 2)). The values show the variation obtained from the duplicates.*Method-1, unidirectional method using Roche Titanium LI

Figshare2015-12-02 更新20

Bacterial microbiome of H2 Aiptasia. Exaiptasia diaphana

海葵微生物组

海洋共生微生物

Bacterial community associated with the H2 strain of the sea anemone Aiptasia

NIAID Data Ecosystem50

The effect of a symbiotic partnership on mucosal surface microbiomes

海洋共生微生物

内共生体-宿主互作

We monitored the external mucosal microbiome of the clownfish Amphiprion clarkii upon the establishment of a symbiotic relationship (termed hosting) with the anemone Entacmaea quadricolor.

NIAID Data Ecosystem40

Comparison of DNA extraction kits in characterizing symbiotic microbial communities in ascidians

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