Path-MGCN: pathway activity based spatial cluster analyses of spatial transcriptomic data

This data repository contains the processed data used for Path-MGCN spatial cluster and the spatial clustering results of Path-MGCN.The spatial transcriptomics datasets used in Path-MGCN are public available:(1) 10x Visium spatial transcriptomics dataset of human dorsolateral prefrontal cortex (DLPFC): http://spatial.libd.org/spatialLIBD;(2) 10x Visium spatial transcriptomics dataset of human breast cancer: https://support.10xgenomics.com/spatial-gene-expression/datasets/1.1.0/V1_Breast_Cancer_Block_A_Section_1;(3) Stereo-seq dataset of mouse olfactory bulb tissue: https://github.com/JinmiaoChenLab/SEDR_analyses;(4) KEGG PATHWAY: https://www.kegg.jp/kegg/pathway.html.