遇见数据集

ENCODE LR-RNA-seq models and expression values

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Zenodo2026-01-30 更新2026-05-26 收录
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In this object are the following files: filt_ab_tpm_mouse.tsv / filt_ab_tpm_human.tsv: Expression levels in TPM for each transcript in human and mouse lr_mouse_library_data_summary.tsv / lr_human_library_data_summary.tsv: Metadata for each dataset in human and mouse cerberus.gtf / mouse_cerberus.gtf: Transcript models in GTF format human_ucsc_transcripts.gtf / mouse_ucsc_transcripts.gtf: Transcript models for transcripts that passed expression filtering (>= 1 TPM in at least one library; transcripts from known human_protein_summary.tsv / mouse_protein_summary.tsv: Summary of protein coding predictions, including ORF locations and NMD status human_triplets.h5 / mouse_triplets.h5: Cerberus H5 objects (see here for specification) that detail the TSSs, ICs, and TESs used in each transcript, as well as the triplets calculated globally and for individual samples. human_swan_graph.p / mouse_swan_graph.p: SwanGraph pickled python objects. viewer_data.tar.gz: Compressed files used for the data viewer comprised of human_triplets.h5, mouse_triplets.h5, human_swan_graph.p, and mouse_swan_graph.p

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Zenodo
创建时间:
2026-01-30
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