Additional file 1 of MDR M. tuberculosis outbreak clone in Eswatini missed by Xpert has elevated bedaquiline resistance dated to the pre-treatment era

Additional file 1: Table S1. Origin of Rv0678 mutant isolates included in homoplastic analysis. Table S2. Drug resistance mutations and cluster analysis of collection 2 strains and EMBL-EBI ENA sequence read archive numbers. Table S3. BDQ and CFZ Minimum inhibitory concentration of 25 Rv0678 mutant and 12 wild type strains. Table S4. WGS of 273 isolates submitted to the EMBL-EBI ENA sequence read archive. Table S5. Epidemiological and genotyping data of 412 Mtbc-strains. Table S6. Phenotypic DST data of 412 Mtbc-strains, resistance mediating mutations for 273 whole genome sequenced isolates. Table S7. Drug resistance mediating mutations of all MDR clusters.