Additional file 3 of Zinc uptake system ZnuACB is essential for maintaining pathogenic phenotype of F4ac+ enterotoxigenic E. coli (ETEC) under a zinc restricted environment

Additional file 3. Differentially expressed genes (DEG) of ETEC C83902 under zinc restricted (Q88) conditions compared to zinc abundant (Z88) conditions. Locus: Genomic coordinates for easy browsing of the genes or transcripts, FPKM: Fragments Per Kilobase of exon model per Million mapped fragments, Q88_FPKM: The gene expression FPKM value of 30 μM TPEN condition, Z88_FPKM: The gene expression FPKM value of 1 mM Zn2+ condition, log2(Q88/Z88): log2(Q88-FPKM/Z88-FPKM), up-or-down: Whether the gene expression under the Q88 condition is up-regulated (up) or down-regulated (down) compared with Z88 condition, p-value: p value of difference test, q-value: p value corrected by Benjamini–Hochberg correction method, Description: Gene description information.