Summary (% or mean ± sd) of paternity assignment comparison (AgR method; Best Pedigreea) of Flock A utilizing MS markers, Parentage SNPs and of a combined marker analysis (Gold Standard).

aBest pedigree refers to the pedigree with the highest assignment probability (Prob) for a particular analysis. In addition the LOD (LOD is the log of ratio (likelihood correct/incorrect), uniqueness (proportion with a unique assignment) and Δ (the LOD difference between the best and next best assignment) is also recorded. bThe MS test consists of 11 SSR markers, the SNP test consists of the 84 Parentage SNP markers and the combined test has both marker sets and is referred to as the ‘Gold Standard’. The mob data is also utilized in the combined ‘Gold Standard’ analysis along with the Dam genotypes.