CITE-seq protein and mRNA counts
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Protein counts were acquired from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100866. <br>LOOM was generated from FASTQ. <code>cellranger</code> processing:<code>cellranger count --id=(desired bam directory) --transcriptome=(transcriptome directory) --fastqs=(fastq directory) --localcores=40 --localmem=100 --chemistry=SC3Pv2</code><code>velocyto</code> processing: <code>velocyto run10x --samtools-threads 60 --samtools-memory 5000 (desired bam directory) (transcriptome directory)/genes/genes.gtf</code>
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figshare创建时间：
2019-06-21
