A Machine Learning Classifier for Assigning Individual Patients with Systemic Sclerosis to Intrinsic Molecular Subsets

DNA microarray and RNA-seq were performed on samples from four controls and eight SSc patients for testing the performance of intrinsic subset classification in two different gene expression profiling platforms. N0901, N0903, N1002, N1003, SSc0882, SSc0916, SSc0918, S0920 have previously been deposited on NCBI SRA at PRJNA237826. The remaining four SSc RNA-seq samples will be available at PRJNAXXXXXX. Microarray gene expression and intrinsic subset assignment were measured in 8 SSc patient and 4 control biopsies