Additional file 2 of Metabolic GWAS-based dissection of genetic basis underlying nutrient quality variation and domestication of cassava storage root

Additional file 2: Table S1. Summary of 299 cultivated and 19 wild accessions used in this work. Table S2. Detailed information of metabolites detected in the replicate 1 of this study. Table S3. Detailed information of metabolites detected in the replicate 2 of this study. Table S4. List of lead SNPs detected in mGWAS from two replications. Table S5. Summary of genome-wide significant associations identified in mGWAS. Table S6. Full lists of significant mGWAS associations. Table S7. Summary of 12 candidate genes assigned from mGWAS results. Table S8. Significant associated information of SNPs at the genomic region of Me3GT. Table S9. SNPs detected at the genomic region of CYP79D1. Table S10. SNPs detected at the genomic region of UGT85K5. Table S11. SNPs detected at the genomic region of CYP71E7b. Table S12. SNPs detected at the genomic region of MeMYB4. Table S13. Summary of 132 annotated metabolites involved in cassava domestication. Table S14. Summary of 14 flavones involved in SR development and co-located with SR weight per plant. Table S15. Expression levels of CG cluster genes in response to MeJA treatment and Xam inoculation. Table S16. The primers used in this study.