Additional file 3: of Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits

The heritability for each trait along with the permutated heritability obtained from the permutation test using the same number but randomly chosen SNPs (which was replicated 5 times and significance is determined as greater or less than the average of the proportion of variance explained by the randomly chosen SNP ± 2 × S.E). The heritability percent difference is simply the difference between the class heritability and the permutated heritability multiplied by 100. (XLSX 13 kb)