Additional file 2: of Identification of a cold-tolerant locus in rice (Oryza sativa L.) using bulked segregant analysis with a next-generation sequencing strategy

Table S1. The PSST of T-pool and S-pool. Table S2. Sequences of specific primers for PSST candidate genes. Table S3. Sequences of specific primers for SNP loci in LOC_Os06g39750. Table S4. Heading time, plant height, panicle number, and grain yield per plant of parents and RIL population in 2014, 2015 and 2016. Table S5. Coefficients of correlation (r) among PSST and PSSN in 2014, 2015 and 2016. Table S6. QTLs for PSSN of rice detected in 3 years. Table S7. Summary of Seq-BSA data for each sample. Table S8. Annotation information of predicted genes for PSST. Table S9. nsSNPs between DN422 and KY131 along with their S-pool and T-pool. Table S10. Information of SNP/InDel in LOC_Os06g39740 and LOC_Os06g39750. Table S11. Haplotype of LOC_Os06g39750 in RIL population and mean PSST of each RIL. Table S12. The Arabidopsis homologous genes of LOC_Os06g39750. (XLS 174 kb)