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资源简介：
This repository contains sequencing reads for metagenomes and transcriptomes prepared from human microbiome-derived cells.
应用场景：
创建时间：
2022-01-24
相关数据集
Identification of regulatory elements from nascent transcription using dREG. Identification of regulatory elements from nascent transcription using dREG
Our genomes encode a wealth of transcription initiation regions (TIRs) that can be identified by their distinctive patterns of transcription initiation. We previously introduced dREG to identify TIRs
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Identification of regulatory elements from nascent transcription using dREG
Our genomes encode a wealth of transcription initiation regions (TIRs) that can be identified by their distinctive patterns of transcription initiation. We previously introduced dREG to identify TIRs
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qPRO-seq of mouse F1 cells
Polymerase Run-On Sequencing (PROseq) performed as previously described (cite original Kwak et al., 2013 and qPRO Judd et al., 2020) with some minor changes. Data is obtained from two F1 hybrid embryo
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Quantifying RNA Synthesis at Rate-Limiting Steps of Transcription Using Nascent RNA-sequencing Data
Precision Run-On sequencing (PRO-seq) data from human K562 cells, mapped to hg38. The raw PRO-seq data was generated in human K562 cells (Vihervaara et al., 2021, Mol Cell; GSE127844). Here, the PRO-s
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Identification of miRNA transcription start sites from nascent transcriptome
miRNAs are key post-transcriptional regulators of gene expression. However, it is still poorly understood how miRNAs themselves are regulated, mainly due to the sparse annotation of miRNA transcriptio
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