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A map of wild rice genome variation

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NIAID Data Ecosystem2026-03-07 收录
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https://www.ncbi.nlm.nih.gov/bioproject/PRJEB2829
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The sample here includes 446 world-wide common wild rice (O. rufipogon) strains and 15 wild rice genomes of outgoup species. The germplasm collections were sequenced on the Illumina Genome Analyzer IIx and HiSeq2000, with approximate two-fold coverage for each accession. The resulting sequence dataset of wild rice consisted of 5 billion paired-end reads that amounted to 1000-fold coverage of the rice genome. The long term goal of this project is to develop a comprehensive platform to unravel the genetic diversity in Oryza and facilitate the genetic mapping of complex traits, to assist genetic study and improvement of the dramatically important crop.
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2012-10-02
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