Ephemera danica Official Gene Set ephdan_OGSv1.0

This dataset presents the Ephemera danica Official Gene Set (OGS) v1.0. The OGS is an integration of automatic gene predictions from Ephemera danica genome annotations v0.5.3, with manual annotations by the research community, performed via the Apollo manual curation software. Manual and automated annotations were lifted over from genome assembly Ephemera danica genome assembly v1.0 to genome assembly Edan_2.0 using the coordinates_conversion and remap-gff3 programs.

Resources in this dataset:
Resource Title: Ephemera danica Official Gene Set ephdan_OGSv1.0.
File Name: ephdan_OGSv1.0.tar.gz
Resource Description: The attached tar.gz archive (ephdan_OGSv1.0.tar.gz) contains the following files:

ephdan_OGSv1.0.gff. Gff3 of all gene predictions of Ephemera danica genome annotations OGSv1.0
ephdan_OGSv1.0_cds.fa. CDS sequences of Ephemera danica genome annotations OGSv1.0
ephdan_OGSv1.0_pep.fa. Amino acid sequences of Ephemera danica genome annotations OGSv1.0
ephdan_OGSv1.0_trans.fa. Transcript sequences of Ephemera danica genome annotations OGSv1.0
ID_map_report.txt. A file containing ID mappings between Ephemera danica genome annotations v0.5.3 and Ephemera danica Official Gene Set ephdan_OGSv1.0
deleted_models.txt. A file containing IDs and names of models removed from Ephemera danica genome annotations v0.5.3 and Ephemera danica manual annotations on genome assembly Edan_1.0 during the creation of Ephemera danica Official Gene Set ephdan_OGSv1.0