HAC1/bZIP60/XBP1 structural and DNA-binding predicted models
收藏DataCite Commons2024-02-15 更新2024-08-19 收录
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https://figshare.com/articles/dataset/HAC1_bZIP60_XBP1_structural_and_DNA-binding_predicted_models/25185794
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Predicted 3D models of HAC1/bZIP60/XBP1 dimer pairs were built through SWISS-MODEL (Waterhouse, et al. 2018). Best-hit structural homologs based on the QMEANDisCO score were used as templates for predicting the protein structure.The binding potential of the predicted dimer pairs was then tested through in silico docking experiments. The CRE DNA substrate containing ‘aureo-box’, TGACGT, (Banerjee and Mitra 2020) from CREB structure PDB ID: 1DH3 (Schumacher, et al. 2000) was used as the ligand in the docking simulations through pyDockDNA (Rodriguez-Lumbreras, et al. 2022).
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figshare
创建时间：
2024-02-15
