Data and analysis scripts for: Lung adenocarcinoma promotion by air pollutants

Code for "Lung adenocarcinoma promotion by air pollutants" manuscript

egfrm_lc_incidence

Epidemiological analyses of EGFRm lung cancer incidence and PM2.5 levels in England (NHS England), South Korea and Taiwan.

ukbb

Epidemiological analyses of lung cancer incidence and PM2.5 levels in England, using the UKBB data set.

mouse_RNA_seq

Analysis of RNA-seq data derived from lung tumour tissue of pollution-exposed mice.

mouse_WGS

Analysis of WGS data derived from lung tumour tissue of pollution-exposed mice.

normal_lung

Analysis of ddPCR for EGFRm from normal lung tissue from the TRACERx and PEACE cohorts.

Analysis of Duplex-seq data from normal lung tissue from the PEACE and BDRE cohorts.