Genome assemblies, gene models, gene annotations, taxonomy classifications, clusters, and counts tables

File description: * .fa.gz - Metagenome-assembled genomes * .faa.gz - Proteins (Amino-acid space) * .ffn.gz - ORFs (DNA space) * .gff.gz - Gene models (GFF3) * clusters.tsv.gz - [MAG, SLC] identifier mapping (No header) * taxonomy_classification.tsv.gz - Taxonomy classifications for MAG * taxonomy_classification.clusters.tsv.gz - Taxonomy classifications for SLC * genome_quality.tsv.gz - Genome quality assessment * genome_statistics.tsv.gz - Genome assembly statistics * identifier_mapping.tsv.gz - [ORF, contig, MAG] identifier mapping (No header, tab-separated) * identifier_mapping.orthogroups.tsv.gz - [ORF, contig, MAG, SLC, SSO] identifier mapping (Includes header, tab-separated) Abbreviations: ORF - Open reading frame MAG - Metagenome-assembled genome SLC - Species-level cluster SSO - SLC-specific orthogroup Citation: * Espinoza, J.L., Dupont, C.L. VEBA: a modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes. BMC Bioinformatics 23, 419 (2022). https://doi.org/10.1186/s12859-022-04973-8 * Espinoza, Josh (2022): Genome assemblies, gene models, gene annotations, taxonomy classifications, clusters, and counts tables. figshare. Dataset. https://doi.org/10.6084/m9.figshare.20263974.v1