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FigS1_16S NJ Topology HKY.pdf

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Figshare2016-05-29 更新2026-04-08 收录
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Supplemental Figures from Pyataeva et al. 2016. DNA barcodes unite two problematic taxa: the meiobenthic Boreohydra simplex is a life-cycle stage of Plotocnide borealis (Hydrozoa: Aplanulata). Zootaxa.<b>Figure S1.</b> Neighbor joining topology for 16S sequences derived from samples of <i>Plotocnide borealis</i> (n=4) and <i>Boreohydra simplex </i>(n=4), along with all (n=1948) publicly available 16S sequences from exemplars of Hydroidolina in Genbank. <i>Protohydra</i> and <i>Plotocnide/Boreohyra</i> samples are found on page 6 of 27 and highlighted in yellow. The topology shows these taxa diverging near the base of a clade containing all sampled members of Aplanulata. <b>Figure S2.</b> Neighbor joining topology for COI sequences derived from samples of <i>Plotocnide borealis</i> (n=4) and <i>Boreohydra simplex </i>(n=5), along with all (n=1614) publicly available COI sequences from exemplars of Hydroidolina in Genbank. <i>Protohydra</i> samples are found on page 3 of 32, and highlighted in yellow, branching among exemplars of Aplanulata, which do not form a clade in the NJ topology. <i>Plotocnide/Boreohyra</i> samples are highlighted in yellow and found united with COI sequences derived from another putative member of Aplanulata, <i>Margelopsis</i> on page 26 of 32. <b>Figure S3.</b> Maximum likelihood topology for 18S sequences derived from samples of <i>Plotocnide borealis</i> (n=2) and <i>Boreohydra simplex </i>(n=2), along with all (n=519) publicly available 18S sequences from exemplars of Hydroidolina in Genbank. <i>Protohydra</i> and <i>Plotocnide/Boreohyra</i> samples are found on page 10 of 18, branching near and at, respectively, the clade including all exemplars of Aplanulata. <b>Figure S4.</b> Consensus of 420 bootstrap maximum likelihood analyses of 18S sequences derived from samples of <i>Plotocnide borealis</i> (n=2) and <i>Boreohydra simplex </i>(n=2), along with all (n=519) publicly available 18S sequences from exemplars of Hydroidolina in Genbank. <i>Protohydra</i> and <i>Plotocnide/Boreohyra</i> samples are found on pages 8 and 9 of 18, branching near and at, respectively, the clade including all exemplars of Aplanulata.
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